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Development of a Synthetic UPR Monitoring System with Signal Amplification in Chinese Hamster Ovary Cells

목차

1. Introduction 1
2. Materials and Methods 4
2.1. Plasmid construction 4
2.2. Cell culture and maintenance 4
2.3. Cell transfection 5
2.4. Generation of stable cell pools harboring a UPR-dependent genetic circuit via recombinase-mediated cassette exchange (RMCE) 5
2.5. Chemical treatment 6
2.6. Fluorescence expression analysis using flow cytometry 7
2.7. Preparation of RNA and cDNA 8
2.8 Evaluation of relative mRNA expression level using qRT-PCR 8
2.9. Regression model 9
2.10. Statistical analysis 9
3. Results 25
3.1. A UPR-responsive synthetic promoter exhibits low inducibility under ER stress 25
3.2. Transcriptional cascade and positive feedback enable UPR- dependent signal amplification under ER stress 27
3.3. Stable expression of a transcriptional cascade with positive feedback enables UPR-dependent signal amplification 32
3.4. Real-time monitoring of UPR dynamics is limited by the long half- life of EGFP and positive feedback-driven maintenance of Tet-On3G after stress relief 37
4. Discussion 41
5. References 45

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