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Regulation of DNA-PKcs-mediated immune signaling by the E3 ligase MARCH5 in mitochondria-damaged cells

미토콘드리아 손상 세포에서 E3 연결효소 MARCH5에 의한 DNA-PKcs 매개 면역신호의 조절

목차

I. INTRODUCTUON 1
II. MATERIALS AND METHOD 9
A. Plasmids and chemicals 9
B. Cell culture 9
C. Transfection and RNA interference 9
D. Generation of March5 KO RAW264.7 10
E. Western blot analysis 10
F. Mitochondrial fractionation 12
G. Pull-down assay 12
H. Ubiquitination assay 12
I. Immunofluorescence 13
J. Reverse transcription-quantitative polymerase chain reaction 13
K. Mitochondrial DNA copy number assay 15
L. ATP assay 15
M. Statistical analysis 16
III. RESULTS 17
A. Establishment of FokI endonuclease systems to generate mtDNA double-strand breaks  17
B. MTERF1-FokI-mCherry and TFAM-FokI-mCherry localize to mitochondria  19
C. Fluorescence signal of the mtDNA is reduced in an activity-dependent manner at the mt-FokI endonuclease  21
D. Specific targeting of mtDNA by the FokI endonuclease reduces the amount of mtDNA  23
E. Mt-FokIs do not affect nuclear DNA damage response and ATP synthesis upon mtDNA degradation  26
F. A type I interferon response is triggered by mtDSBs even in the absence of cGAS  29
G. Mitochondrial DNA cleavage increases phosphorylation of IRF3 and HSPA8 in a variety of cell lines  32
H. DNA-PKcs mediates phosphorylation of HSPA8 and IRF3 in response to breaks in mtDNA  34
I. Cleaved mtDNA elicits DNA PKcs-mediated type I interferon response via the VDAC macropore  37
J. Mitochondrial E3 ligase MARCH5 degrades DNA-PKcs in a proteasome-dependent manner  40
K. MARCH5 binds and ubiquitylates activated DNA-PKcs  43
L. MARCH5 suppresses DNA-PKcs-mediated type I interferon response  46
M. LPS treatment elicits DNA-PKcs-dependent type I interferon response in murine macrophages  48
N. MARCH5 prevents prolonged type І Interferon response in murine macrophage stimulated by LPS  51
IV. DISCUSSION  54
REFERENCE  57
국문요약  64

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